Usecases

The following use cases illustrate applications of CoMorMent containers:

• gwas_demo.md describes how to run a demo GWAS analysis with plink2 and regenie following the CoMorMent specifications.

• gwas_real.md illustrates usage of gwas.py analysis on MoBa height and depression phenotypes

• meta_simu.md describe use cases related to meta-analysis

• bolt-lmm_demo.md describes how to run bolt-lmm

• scripts/pgs/LDpred2/README.md describes how to run PRS analyses using LDpred2